All functions

Ident2cellList()

Get list of cell identity classes

REMatrix()

Compute Relative Expression Levels

TEI()

Compute the Transcriptome Evolutionary Index (TEI)

bootTEI()

Compute a Permutation Matrix of Transcriptome Evolutionary Index (TEI)

of2orthomap()

Extract orthomap from OrthoFinder

orderMetaData()

Order meta.data from Seurat object according to data

pMatrixTEI()

Compute Partial Transcriptome Evolutionary Index (TEI) Values

pStrataTEI()

Compute Partial Transcriptome Evolutionary Index (TEI) Strata Values

rcpp_boottei_parallel

rcpp_boottei_parallel

rcpp_meanMatrix_parallel()

rcpp_meanMatrix_parallel

rcpp_pMatrix_parallel()

rcpp_pMatrix_parallel

rcpp_pStrata_parallel()

rcpp_pStrata_parallel

rcpp_tei_parallel()

rcpp_tei_parallel

seurat2monocle3()

Transfer Seurat object to monocle3 object