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make_dagchainer

Source: R/make_dagchainer.R
make_dagchainer.Rd

This function tries to build the DAGchainer from source code forked within CRBHits

Usage

make_dagchainer(build_dir = file.path(find.package("CRBHits"), "extdata"))

Arguments

build_dir

directory to build DAGchainer [mandatory]

Value

compile DAGchainer and return binary path

References

Haas BJ et al. (2004) DAGchainer: a tool for mining segmental genome duplications and synteny. Bioinformatics 20 (18), 3643-6.

Author

Kristian K Ullrich