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filter_eval

Source: R/filter_eval.R
filter_eval.Rd

This function filters BLAST-like tabular output according to evalue.

Usage

filter_eval(rbh, eval = 0.001, inverse = FALSE)

Arguments

rbh

BLAST-like tabular matrix [mandatory]

eval

evalue [default: 1e-3]

inverse

specify if filter should keep the removed values [default: FALSE]

Value

rbh matrix

Author

Kristian K Ullrich

Examples

## load crbh data
data(ath_aly_crbh)
dim(ath_aly_crbh$crbh1)
#> [1] 211  16
dim(filter_eval(
    rbh=ath_aly_crbh$crbh1,
    eval=1e-100))
#> [1] 111  16